Index

B

birch() (in module multitraitclustering.clustering_methods)

C

calc_medoids() (in module multitraitclustering.data_processing) calc_per_from_comp() (in module multitraitclustering.data_processing) calc_sum_sq() (in module multitraitclustering.data_setup) centroid_distance() (in module multitraitclustering.data_processing) chart_cluster_compare() (in module multitraitclustering.plotting_funcs) chart_cluster_pathway() (in module multitraitclustering.plotting_funcs)

chart_clusters() (in module multitraitclustering.plotting_funcs) chart_clusters_multi() (in module multitraitclustering.plotting_funcs) cluster_all_methods() (in module multitraitclustering.multi_trait_clustering) compare_df1_to_df2() (in module multitraitclustering.data_setup) compare_results_list_to_external() (in module multitraitclustering.data_processing) compute_pca() (in module multitraitclustering.data_setup)

D

dbscan() (in module multitraitclustering.clustering_methods)

df_check() (in module multitraitclustering.checks)

F

float_check() (in module multitraitclustering.checks)

format_strings() (in module multitraitclustering.string_funcs)

G

get_aic() (in module multitraitclustering.multi_trait_clustering)

get_bic() (in module multitraitclustering.multi_trait_clustering) gmm() (in module multitraitclustering.clustering_methods)

I

int_check() (in module multitraitclustering.checks)

K

kmeans() (in module multitraitclustering.clustering_methods)

kmeans_minibatch() (in module multitraitclustering.clustering_methods) kmedoids() (in module multitraitclustering.clustering_methods)

L

load_association_data() (in module multitraitclustering.data_setup)

long_df_from_p_cnum_arr() (in module multitraitclustering.data_processing)

M

mat_dist() (in module multitraitclustering.data_setup) method_string() (in module multitraitclustering.multi_trait_clustering) module multitraitclustering multitraitclustering.checks multitraitclustering.clustering_methods multitraitclustering.data_processing multitraitclustering.data_setup multitraitclustering.multi_trait_clustering multitraitclustering.plotting_funcs multitraitclustering.string_funcs multitraitclustering module

multitraitclustering.checks module multitraitclustering.clustering_methods module multitraitclustering.data_processing module multitraitclustering.data_setup module multitraitclustering.multi_trait_clustering module multitraitclustering.plotting_funcs module multitraitclustering.string_funcs module

N

num_to_word() (in module multitraitclustering.string_funcs)

O

overlap_bars() (in module multitraitclustering.plotting_funcs)

overlap_pairs() (in module multitraitclustering.data_processing) overlap_score() (in module multitraitclustering.data_processing)

P

pathway_bars() (in module multitraitclustering.plotting_funcs)

S

str_check() (in module multitraitclustering.checks)